PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g103520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 342aa MW: 37906.4 Da PI: 5.8599 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87.3 | 1.1e-27 | 86 | 168 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg Pd.00g103520.m01 86 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsngvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 168 689********...*****999*******************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MGTRPQQPSR ERADVDDDMA GQSVSMSGSV GSPSSRSEQT MATPAGDTNF LRLNHPDVHG 60 DDAGSQGAVG SKKKKRGQRA VAGDKSGRGL RQFSMKVCEK VESKGRTTYN EVADELVAEF 120 ADPSNGVTSP DQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLNDIEEL 180 KTERLGLRNR IEKKASYLQE LEEQYVGLQN LIQQNEQLYH SGDALSGGVA LPFILVQTRP 240 HATVEVEISE DMQLVHFDFN STPFELHDDN YVLKAMKFCE RPQADDGTQN LTADGGEGCS 300 MSSMYQPQIP LPSMLNTPVR PPTSPPIPGI LKARVKHEHH GQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-150 | E2F/DP family protein |