PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1035100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 582aa MW: 65776.6 Da PI: 5.2051

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1035100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.6e-08	481	525	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + WT+eE+++++d+vk + W++ +r + ++t+++++s+++++ Pd.00g1035100.m01 481 LQWTAEEEKRFKDLVKSNSPSFWNRASRWFR-KKTRENLVSYYFNV 525 57***************************.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MAGWSSLTPG SVLDCVETND AYQKNGSCID SDIDEIGDRG VVRPIPAVID DRQPVDLFKL 60 FCLVRDRGGY DWVSKNSLWS FVAKELGLDG GATASVKLIY FKYLNELEKW FREGCNSRSS 120 GNGQSGLYGE FQLLSSESER EFRDLLLDGP EQKGKGDGPV QFESDENGKI EFNLPDTKDA 180 YGMHAGADQC KDDDDEKVCN DDQNGVLISL NSLNKKENDR KRKRESLSGM LNWVVQIAKQ 240 PNDPSIGVIP GPTNWKEHKG DECWFQVIRA REALLLRRNV DSKTEESLLQ KKLKTHPLLY 300 EDNIVAGHQS SERLRCSERF PNSVKSRSCP CCSSCSVPQS NLISPRKKEL DNISKEQAPA 360 EVDLLATNTM VCPSVDAPHE KHVSVGTLFQ ADVPEWTGVA SESDIKWLGT RVWPLQCKED 420 SSLHETDLTG KGRPDFCGCR LPGSVVCIRF HIAEARMKLK RELGSLFYRW RFDRMGEEVS 480 LQWTAEEEKR FKDLVKSNSP SFWNRASRWF RKKTRENLVS YYFNVFLVQS RSYQNRVTPK 540 NIDSDDDETE FGSFSNGFGH DAVEVSANFV ACSQNQQCTD LD

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MAGWSSLTPG SVLDCVETND AYQKNGSCID SDIDEIGDRG VVRPIPAVID DRQPVDLFKL  60
FCLVRDRGGY DWVSKNSLWS FVAKELGLDG GATASVKLIY FKYLNELEKW FREGCNSRSS  120
GNGQSGLYGE FQLLSSESER EFRDLLLDGP EQKGKGDGPV QFESDENGKI EFNLPDTKDA  180
YGMHAGADQC KDDDDEKVCN DDQNGVLISL NSLNKKENDR KRKRESLSGM LNWVVQIAKQ  240
PNDPSIGVIP GPTNWKEHKG DECWFQVIRA REALLLRRNV DSKTEESLLQ KKLKTHPLLY  300
EDNIVAGHQS SERLRCSERF PNSVKSRSCP CCSSCSVPQS NLISPRKKEL DNISKEQAPA  360
EVDLLATNTM VCPSVDAPHE KHVSVGTLFQ ADVPEWTGVA SESDIKWLGT RVWPLQCKED  420
SSLHETDLTG KGRPDFCGCR LPGSVVCIRF HIAEARMKLK RELGSLFYRW RFDRMGEEVS  480
LQWTAEEEKR FKDLVKSNSP SFWNRASRWF RKKTRENLVS YYFNVFLVQS RSYQNRVTPK  540
NIDSDDDETE FGSFSNGFGH DAVEVSANFV ACSQNQQCTD LD