PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1034150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 299aa    MW: 32508.1 Da    PI: 4.8139
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1034150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.31.8e-36321232102
                        HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
       HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                        Fl+k+y++++d+++++liswse+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+k l
  Pd.00g1034150.m01  32 FLTKTYQLVDDPSVDDLISWSEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKGL 114
                        9*****************************************************************99.........*************** PP

                        XXXXXXXXX CS
       HSF_DNA-bind  94 lekikrkks 102
                        l++i+r+k 
  Pd.00g1034150.m01 115 LREIQRRKI 123
                        ******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MASLQADQNG DSGPANGAGG GGDSQRTLPT PFLTKTYQLV DDPSVDDLIS WSEDGSAFIV  60
WRPAEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVVPDRW EFANDCFKRG EKGLLREIQR  120
RKISPSVSAS PAAITATLAT VAPGVSPANS GDEQVISSNS SPVAPPATML SRIRSCTTTS  180
DVLEENERLR KENMQLSHEL TQLRGLCNNI LALMTNYASG QLEGGGGGGG SVMDEGKPLE  240
LSPVKEAEPL FGVSIGVKRV RRDEEEEEQH REGSEAMKSE PSDGSSKRDQ DSTWLELGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.14e-85HSF family protein