PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1033790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 301aa    MW: 33554.2 Da    PI: 8.3335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1033790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-18129180155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +++Wv+e+r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  Pd.00g1033790.m01 129 PVYRGVRRRN-NNKWVCELREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 180
                        68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLPRVVWGLA TPVAHASTWR LHTVRVVVSS VGPHLPRHPQ SIKAPSPSLS VLALHTPLRN  60
TTQNIQITLL MDMFYAQLSN SPDQTESSSF SDASVTTLPA SSSDENVILA SSRPKKRAGR  120
RVFKETRHPV YRGVRRRNNN KWVCELREPN KKKSRIWLGT YPTAEMAARA HDVAALAFRG  180
KLACINFADS AWRLPLPASM DTMDIRRAAA EAAEGFRPAE FGGLSSDSSD EKEKIFSVDM  240
EKSSSSLCLF YLDEEEMFDM PRLIDNMAQG LLLAPPQCSA GYLNWDDMET EADAKLWSFS  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-62ERF family protein