PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1032720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | LBD | ||||||||
Protein Properties | Length: 223aa MW: 25082.1 Da PI: 4.3864 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 118.5 | 4e-37 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 +C aCk+lrrkC+ +Cv+apyf+ +q + +fa+vhk+FGasnv+kll +lp ++r+da+ +l yeA ar+ dPvyG+++ i++lqqq+ l+ Pd.00g1032720.m01 7 SCGACKFLRRKCTGECVFAPYFCYDQaADHFAAVHKVFGASNVSKLLLHLPVQNRSDAAITLSYEALARMCDPVYGCFSQIFALQQQVVYLQ 98 6************************9789*************************************************************** PP DUF260 92 aelallkee 100 +e+++l+++ Pd.00g1032720.m01 99 EEIETLGNQ 107 ****99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MTGLGSSCGA CKFLRRKCTG ECVFAPYFCY DQAADHFAAV HKVFGASNVS KLLLHLPVQN 60 RSDAAITLSY EALARMCDPV YGCFSQIFAL QQQVVYLQEE IETLGNQMVN FATGHSSNSF 120 SELQVFSQHD AVETQYLQSQ LPEPLQLPVM ENATANQVFN SQMDIQMPPL HEWEEVDLFG 180 DQSVPDPLER FLEGPQENLG HNPWLNETAN TRNYNKGSSW DLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 7e-57 | LBD family protein |