PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1032020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32904.7 Da PI: 6.9718 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 24 | 69 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+eE +++ a +++ + +W ++a++++ g+t +++ +q Pd.00g1032020.m01 24 EWTKEENKKFESALAMFDEKtpdRWLKVASMIP-GKTVIDVIKQYQE 69 7********************************.*********9996 PP | |||||||
2 | Myb_DNA-binding | 38.3 | 3.1e-12 | 124 | 168 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky Pd.00g1032020.m01 124 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVISKTPTQVASHAQKY 168 7*****************************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
METLYPASYM ADSNWFIQDS QSSEWTKEEN KKFESALAMF DEKTPDRWLK VASMIPGKTV 60 IDVIKQYQEL EEDVSEIESG RFPIPGYLTS SFTLDLGDDR NFDANRKRPS AARGSDQERK 120 KGIPWTEEEH RRFLMGLLKY GKGDWRNISR NFVISKTPTQ VASHAQKYFM RQHSGGKDKR 180 RPSIHDITTV NLTSTTPSEN NRPPLDQSPP EQKSTESPKA LLDWNACDDG GAMVFGSTHG 240 SLFESSPYDV AAEGIKLQLQ KLYSSANFAA HAKPQNSMYL MQTSRHQIHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 5e-95 | MYB family protein |