PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1030130.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 488aa MW: 54938.7 Da PI: 8.4601

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1030130.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.5e-07	369	416	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E lvd++ ++G g+W+ I r + Rt+ +++++w+++l Pd.00g1030130.m02 369 WTLSEVTTLVDGISEYGVGRWTDIKRVLFsssAYRTPIDLRDKWRNLL 416 **************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MKSQRVKVEG SFAPALEDET ETIEHLLAEP KSEYVTVDGV LCCGKENAGK CVDIEDFSSG 60 YDFGLNTYSG GLHSAHPRGR YDELEFGVLD GLLDEVDEVE DIHAINGLAS PCDDYLLDIG 120 FTGKASELGF GPCEKSHLGN SSSESQSPRL SGSSNGAVGI SESSTVTIQE FECKNNSIEK 180 AVTHEFHGGF RRKKRRRTPV EGNVYPASIN LQNLELDNDE KTLVKEIVSG ENEKLSVEAT 240 KLGAFRKEKR LRKPTLRYIE EFSGKKSKDS NERENCSALT ATQDRSKVRC QNEHHQMSPG 300 ILSSVPEEDS ISENQTLAEF RTQRKLAKKH ASILALESDE QPITSESEDD HVPKKRSRKH 360 DRRKHQRMWT LSEVTTLVDG ISEYGVGRWT DIKRVLFSSS AYRTPIDLRD KWRNLLRASC 420 GKKMKKEVEQ KEMRALPKSL VRRVRELATV HPYPRQRGKK FAPPILPTPS KSASSDLIRK 480 YVRRKNRS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MKSQRVKVEG SFAPALEDET ETIEHLLAEP KSEYVTVDGV LCCGKENAGK CVDIEDFSSG  60
YDFGLNTYSG GLHSAHPRGR YDELEFGVLD GLLDEVDEVE DIHAINGLAS PCDDYLLDIG  120
FTGKASELGF GPCEKSHLGN SSSESQSPRL SGSSNGAVGI SESSTVTIQE FECKNNSIEK  180
AVTHEFHGGF RRKKRRRTPV EGNVYPASIN LQNLELDNDE KTLVKEIVSG ENEKLSVEAT  240
KLGAFRKEKR LRKPTLRYIE EFSGKKSKDS NERENCSALT ATQDRSKVRC QNEHHQMSPG  300
ILSSVPEEDS ISENQTLAEF RTQRKLAKKH ASILALESDE QPITSESEDD HVPKKRSRKH  360
DRRKHQRMWT LSEVTTLVDG ISEYGVGRWT DIKRVLFSSS AYRTPIDLRD KWRNLLRASC  420
GKKMKKEVEQ KEMRALPKSL VRRVRELATV HPYPRQRGKK FAPPILPTPS KSASSDLIRK  480
YVRRKNRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	197	RRKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-19	MYB_related family protein