PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1028760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 316aa MW: 34577.3 Da PI: 5.3588 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 71.1 | 1.5e-22 | 136 | 184 | 1 | 46 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk 46 ldDg++WrKYGqK++ g+++pr+YYrCt++ C ++k+v+rs++dp+ Pd.00g1028760.m01 136 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnaqCCLATKQVQRSDKDPT 184 59***************************9876799***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MENCNMHGEK MSLINELAQG RELARQLQIH LNVPSSSHGT RESLVQKIIV SYEKALSMLN 60 SSSSASGGEQ QLPTGHAAIR MIESPPPSLN GSPLSEDSDR EFKDQDNKDS SRKRKTLPRW 120 TQQIRVTSGM GLEGPLDDGF SWRKYGQKDI LGAKYPRGYY RCTHRNAQCC LATKQVQRSD 180 KDPTNSMDIV DPQQNQQQPQ DLLLAIPQGL TVVTEGLDAG DQELFPYNPL NHNYVGHFSP 240 PFMGPATSGT QYFSASEQGF GGGSQSFQGA ECEIAEILSS STSATNSPAA LGFPFGQADQ 300 NLYPNFSFDG PGFFSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 116 | SRKRKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 2e-38 | WRKY family protein |