PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1028680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 321aa MW: 36066.9 Da PI: 4.1734 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 73 | 122 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp r r +lg+f taeeAa +++a+ kl+g Pd.00g1028680.m01 73 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTFETAEEAAMVYDNAAIKLRG 122 89*******.**********82....35*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MTDPDATDSS SGEEDDFFGR QRVKHYVHEI NIETDFRNTL VLPNNGRKRL TVEPPASRRT 60 VKNSVSQTNG SRKFRGVRQR PWGKWAAEIR DPARRVRLWL GTFETAEEAA MVYDNAAIKL 120 RGPDALTNFV SPLPKEEEKP ELPVEPLIEE AEPVIESLEV EITNGTTSAS GYDSGSESHN 180 NLSSPTSVLH FRTQPKMEEA HEPQKLQVFD QVMQECEDET GTNFASDDLG NYLPLDLPYL 240 DDVFSFPAPD SPLFFDTPMF FDDDATAAAA KLPECLLKED FSDMFRDTYD TSLSPTTSSM 300 CQGGEDYFQD ILFCSDPLVV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-44 | ERF family protein |