PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g102790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 228aa MW: 25268.8 Da PI: 8.509

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g102790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.6	0.0018	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Pd.00g102790.m01 44 FTCKTCNREFPSFQALGGHRASH 66 89**********99999998887 PP
2	zf-C2H2	12.3	0.00053	95	117	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H Pd.00g102790.m01 95 HECHICGLEFAVGQALGGHMRRH 117 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MKRGREDQDH QTLDLVNCLM LLSKIDQPDS SPTKAEDLKR GRVFTCKTCN REFPSFQALG 60 GHRASHKKPK LMPGGAVDLL QLAQSPGSPA KPKTHECHIC GLEFAVGQAL GGHMRRHREE 120 IQANAVRARS SPAMPVLKNT DDLDQAKSCD HHRTISCLEY VSFSIEGFCV FFTPSSSQKN 180 EPGWNMMHSC FVSTLDVLSS QAEALGLGFQ FHGVKKESSN FKKDVSRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	8e-34	C2H2 family protein