PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1026920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 219aa    MW: 23753.6 Da    PI: 4.9547
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1026920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-1956106155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  Pd.00g1026920.m01  56 PVYRGVRRRN-SGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAIALRG 106
                        68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MDGFCPYYVD PQPCGASSEV PESSSASDNS SARPVLASTY PKKRAGRKKF KETRHPVYRG  60
VRRRNSGKWV CEVREPNKKT RIWLGTFPTA EMAARAHDVA AIALRGRSAC LNFADSAWRL  120
PAPASANAKD IQTTASQAAE AFRPPAEGSD EVSGASAVAA LECASASEQV FYMDEEAVFG  180
MPGLLANMAE GMLLSPPLYT EDDDDVEFYA DVPLWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-76ERF family protein