PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1026760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 116aa MW: 13258.6 Da PI: 8.5084 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 32 | 1.6e-10 | 43 | 65 | 29 | 51 |
HHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 29 vLCdaevaviifsstgklyeyss 51 vLCda+v+viifs++g+lye+ss Pd.00g1026760.m01 43 VLCDAQVSVIIFSQKGRLYEFSS 65 9********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MCCPVLISPS HKVVVLHKFL HFSLLASVRA LQIFEGVSRL GHVLCDAQVS VIIFSQKGRL 60 YEFSSSDMQE TIKRYHKHAK AGQTNKIEVE EYVEVRNSIL EFGLIHLLVV IKQMHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.4 | 3e-17 | MIKC_MADS family protein |