PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 338aa    MW: 39097.1 Da    PI: 10.3817
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.91e-19641451199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + s+rl++p kf+e+++g+  + ++  l+ +s + W+vkl  + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f  +vk++++
  Pd.00g1024920.m01  64 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 145
                        4.467********999888..4568***************..********************************998999..9999987 PP
2B342.71e-132413191598
                        -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        r+++p+k a + g+  +    ++l+d++grsW v+l+   +++r  ++ GW e  kan++  gD++vF+l+++    + +++fr
  Pd.00g1024920.m01 241 RVTIPNKLAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLDMAIGWTECRKANQISPGDSIVFELVKQ--DVMQFHIFR 319
                        789******999988544..7***************5.4555669999*********************9863..334667776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAEARKQVKV RTAKQDQSLE YLNLWQQKSE NKTWLVLLTK IQMARPRKRS PKKPSFFKIL  60
IGDFSQRLRI PPKFIENFNG QSLRKCALRG PSRQWWDVKL EERENSLFFR DGWQGFVKDH  120
VLEVGDLLVF SYNGKSKFKV KIYDRSACEK NVEVAERRSG SPVPLVNKGN QAQVKDEIVE  180
LDTEDCENKT IYSDRRSCKY PISEKRPVSF CVQETSTGSI LFKSENPCFL VCSRKRYLLY  240
RVTIPNKLAV AEGLRRRDAV MLQDPTGRSW LVELRVESRN RLDMAIGWTE CRKANQISPG  300
DSIVFELVKQ DVMQFHIFRG AVGGNRLSVI TAAPNVKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-23B3 family protein