PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1024870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 162aa MW: 18456.6 Da PI: 9.1289 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.2e-41 | 65 | 141 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+e+C ad+ eak+y+rrhkvCe+hskapvv+vsgl+qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++ Pd.00g1024870.m01 65 CCQAERCGADFVEAKRYYRRHKVCEFHSKAPVVMVSGLRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSS 141 6**************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MEAKSFEGRQ SWKEKANKDV VDEVEDDSEE EEAGGGLMMR FEENEKQKKA GRRGSGGGGG 60 VSPPCCQAER CGADFVEAKR YYRRHKVCEF HSKAPVVMVS GLRQRFCQQC SRFHELTEFD 120 EAKRSCRRRL AGHNERRRKS SGEPYGEGSS RRGVASKQFQ IR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 1e-45 | SBP family protein |