PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 171aa    MW: 19950.7 Da    PI: 8.714
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.97.3e-181769456
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                       + ++t+eq++ Le+ F +n+++  e++  LAk+lg++ rqV +W+qN+Ra++k
  Pd.00g1024540.m01 17 KKRLTQEQVNLLERSFTSNNKLEPERKLLLAKQLGIPPRQVAIWYQNKRARWK 69
                       5679************************************************9 PP
2HD-ZIP_I/II110.31.3e-3516107293
        HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                        +k+rl++eqv+lLE+sF++++kLeperK  la++Lg+ prqva+W+qn+RAR+kt+ lE dy+a+++++++  +e++rLek+ve+Lr elk+
  Pd.00g1024540.m01  16 NKKRLTQEQVNLLERSFTSNNKLEPERKLLLAKQLGIPPRQVAIWYQNKRARWKTQSLELDYNAIQAKLKTALAEKRRLEKDVERLRGELKK 107
                        79**************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEFFHTPNHK HSFQHNKKRL TQEQVNLLER SFTSNNKLEP ERKLLLAKQL GIPPRQVAIW  60
YQNKRARWKT QSLELDYNAI QAKLKTALAE KRRLEKDVER LRGELKKAHD LVLVLNQTQE  120
LPAHPVICSM FNSTSAEEGV GSSSLQQHED QVSDHEVKQL EELYACLIDM Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.12e-35HD-ZIP family protein