PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1020930.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 322aa MW: 36257.8 Da PI: 4.2445 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5e-15 | 26 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ ++++++ +G++ W++Ia+ ++ gRt++++k+ w+++l Pd.00g1020930.m01 26 RGNFTREEEDSIIRLHEAWGNK-WSKIASQFP-GRTDNEIKNVWNTHL 71 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MINCLLRCGK SCRLRWINYL RPDLKRGNFT REEEDSIIRL HEAWGNKWSK IASQFPGRTD 60 NEIKNVWNTH LKKKLGFKNS EFCGDESKEL SSITSSSSSS SSSASILSGG KPSVAGELEH 120 QSADQETSMA NNNPHHDPCI LTIPEELDLD SPMELINQFR PDPKDLKELT SSSVSSNESN 180 GSSSSQLDIS IPSEEQMDFL FDFSDPNYDI PLEPDSDFWN MFDGFVPFQS NEVQLNQAEA 240 CKSSNYGQHE NEKWLSYLES ELGLDQPTAD STGQEFLAQV TTGQLLPETF QCDKMPNPAA 300 EFDQSLDYFQ MWPSLPHNNS SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12820.1 | 2e-40 | MYB family protein |