PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1020620.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 317aa MW: 34918.4 Da PI: 5.6766 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39 | 1.4e-12 | 142 | 187 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L Pd.00g1020620.m01 142 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 187 799***********************6.....4***************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 317 aa Download sequence |
MDHMGLDADV SDGEWFYVMS LARSFSIGES AISASVPGKA FSSGSVVWLT GAHELQFYNC 60 DRAKEAQMHG FQTLVCIPTP TGVLEMGSSD SIRENWSLVQ QAKSLFGSDL ICSPDYSDSD 120 GPKRTPKKRG RKPGLGRDTP LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA 180 VSYINELKTK VDELESQVQR ESKKVKVETG DNLDIQSTTT SVEQIAKPPS SSANGSGFEV 240 EVKIVGTDAM IRVQSENANY PSAGLMAALR DLELQIHHAS LSCINELMLQ DIVVKVPENM 300 RSEDSLKSAL LRILDQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00870.1 | 4e-77 | bHLH family protein |