PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1020620.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 317aa    MW: 34918.4 Da    PI: 5.6766
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1020620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12142187454
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +h e+Er+RR+++N++f  Lr ++P+       +++Ka+ L  Av YI++L
  Pd.00g1020620.m01 142 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 187
                        799***********************6.....4***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MDHMGLDADV SDGEWFYVMS LARSFSIGES AISASVPGKA FSSGSVVWLT GAHELQFYNC  60
DRAKEAQMHG FQTLVCIPTP TGVLEMGSSD SIRENWSLVQ QAKSLFGSDL ICSPDYSDSD  120
GPKRTPKKRG RKPGLGRDTP LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA  180
VSYINELKTK VDELESQVQR ESKKVKVETG DNLDIQSTTT SVEQIAKPPS SSANGSGFEV  240
EVKIVGTDAM IRVQSENANY PSAGLMAALR DLELQIHHAS LSCINELMLQ DIVVKVPENM  300
RSEDSLKSAL LRILDQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.14e-77bHLH family protein