PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1020060.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 483aa MW: 53920.8 Da PI: 5.7678 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111 | 8.3e-35 | 16 | 106 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl k+y++++d++++e++sws+n++sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +++k+l Pd.00g1020060.m01 16 FLLKTYDMVDDSATDEIVSWSTNKKSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFIQDQKHL 98 9****************************************************************999.........*************** PP XXXXXXXX CS HSF_DNA-bind 94 lekikrkk 101 l++i+r+k Pd.00g1020060.m01 99 LKNIHRRK 106 ******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MEGASTAGGG GGPAPFLLKT YDMVDDSATD EIVSWSTNKK SFVVWNPPEF ARLLLPTYFK 60 HNNFSSFIRQ LNTYGFRKID PERWEFANED FIQDQKHLLK NIHRRKPIHS HSNPQGSMVD 120 PERAALDDEI EKLSHDKATL EANISRFKQQ RSDAKLQLED LTQRVNSMEQ RQKDLLKFLD 180 KNVQNPTFVE HLTRKIEAMD FSACNKKRRL PDVDHLQPVV ENSFVDNQSS SRSEFGNIFH 240 QDFSSKLRLE LSPAVSDINL VSRSTQSSNE DGYSPTRKIS EELKGVQKGT EGLLFAPETL 300 ELSDTGTSFA FKMDSLLSRK VLTVGNPRLH SLQPGLSSNE EGDGHISCQL KLTLASSPLQ 360 VNSSPHSATI PQVGQDISKS LASGLNANGK ESDIRAFTNK NPADEDVHKT CSLEATNNNQ 420 GPPPAPARVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRLGHG MSRSAKDAET 480 LSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13980.1 | 1e-171 | HSF family protein |