PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 776aa    MW: 87957.9 Da    PI: 5.7215
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.51.9e-1123997731373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avss+d++ +++lL+++++++spdgd  qRla++f++AL+ar+a++ +++     + ++++++++++l+a+++   ++P+ ++
  Pd.00g101880.m01 399 LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPDGDGSQRLAHFFANALEARMAGTDTGTRMFYVSLASKRTSVVDTLKAYQVSLSACPFKRI 491
                       6899***************************************************777777777888888888******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s +  N++Il+ +e+++++Hi+Df+i +G+QWp L+q L++Rp+gpp+lRiTg++ p++g   ++ +eetg+rLak++e+++vpfe+n+++++
  Pd.00g101880.m01 492 STFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRPGGPPKLRITGIEVPQPGfrPADWIEETGRRLAKYCERFNVPFEYNAIASQ 584
                       ***********************************************************9*9****************************999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++le+L+++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++  + ++n++ F++rf eal ++sal+d+++ +++r
  Pd.00g101880.m01 585 NWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDINIAR 677
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++eer k Ere+ gre++nv+aceg er+er et+++W+ r ++aG++p+pl++++ k  k  +r  + + + ++++s+++++gWk+r +++ 
  Pd.00g101880.m01 678 DNEERLKFEREFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDQDMLKIFKDKVRAWYHKDFVIDQDSDWMLQGWKGRIVYAS 770
                       ********************************************************************888********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g101880.m01 771 SCW 773
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    
MDPTINGVPD YTNGFNIDAE PFLPNSTQFP NLINEYQFNQ LSPDLNFLDN HFSLPSPDLE  60
PGNFVPSISV SSDGESFVPS TSLSPDGVSF APPVTTVSPG GDSSSDDNDY SETVFKFINQ  120
ILMEENIEKK PCMFYDPLGL RDTEKSFYDA LGQKYPSSSP NQQPLYIDQN VESPDDQKPF  180
LSQTSLPNDH TFQFNSHPNS QLSVPLTNDL TSVGDELHVD NALQGSSVNE FLAQNIFTDS  240
ESILQFNRGL EEASKFLPKD NQLVINLESN TTYPKVKRHA PTVIVKKEKS ERKKEKSERK  300
NSPNGSWGRK NHERGDVAPE EERSSKQSAV YIQESELSEM FDRVLLCTGG NNESPCDNVA  360
LQNEASQALQ PSGHPQESNG NGGKARAKKQ GKKKETVDLR NLLILCAQAV SSNDFRTTSE  420
LLKQVRQHSS PDGDGSQRLA HFFANALEAR MAGTDTGTRM FYVSLASKRT SVVDTLKAYQ  480
VSLSACPFKR ISTFFKNKMI LKMAEKATTL HIVDFGILYG FQWPILIQHL SKRPGGPPKL  540
RITGIEVPQP GFRPADWIEE TGRRLAKYCE RFNVPFEYNA IASQNWESIK LEDLKTERNE  600
VLAVNCMLRF KNLLDETVEV NCPRDSVLKL IRRMKPDIFV HTIVNGSYNA PFFVTRFREA  660
LFHFSALYDA FDINIARDNE ERLKFEREFY GREAMNVIAC EGLERVERPE TYKQWQLRCT  720
RAGLRPLPLD QDMLKIFKDK VRAWYHKDFV IDQDSDWMLQ GWKGRIVYAS SCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein