PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1018630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 568aa MW: 65028.5 Da PI: 7.678

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1018630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.2	2.2e-14	5	51	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 +WT+eEd+ll ++++q+G g W++++ gRt++++k++w+ + Pd.00g1018630.m01 5 PWTKEEDQLLRKCIEQYGEGKWHRVPLLAArlPGRTGNDVKNYWNCH 51 7********************9976666666*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE 60 AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL PMPMLCNIGD 120 GQNQMFQAEH DESNKNVPSV EEEDINDGIN MACLYKFGVS ARFIMAYIPP HKRHSKETER 180 PLPTPELLAP QFKKKLDLRS SKSNADLDGK VIYANHARSR WCIIGLDDEN QFPSSVNLEP 240 ISWETTERRI GEKPLALINT SLDKEGSEVK WYLPKSPWVS IAENVLEDLL SSFENVKNDM 300 KCPKLEQVKP SLVARVGKVL FQKSPSVNME SIRNNLDTEI LKQWKRLFYT NLPVSYKENI 360 LKKVVPNIGV DFEEEKDVYQ VKLSDSTRPD SILSCKCSVM KEHGKLQLHK IELNQLRDMV 420 IDISCPNKNL DLRVMLSTKR PVTALSDDEM QSIRDLISSA VLDPDVKGGL RWPLGKESSG 480 DRYKVVGIWH VIANMYTNPS LRLKVRHADR FDFRTSTGEA TWEVSLMLEK VLSKLQEEKV 540 EVSSISEILE ENMRMIWDNF LCSEHFLI

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE  60
AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL PMPMLCNIGD  120
GQNQMFQAEH DESNKNVPSV EEEDINDGIN MACLYKFGVS ARFIMAYIPP HKRHSKETER  180
PLPTPELLAP QFKKKLDLRS SKSNADLDGK VIYANHARSR WCIIGLDDEN QFPSSVNLEP  240
ISWETTERRI GEKPLALINT SLDKEGSEVK WYLPKSPWVS IAENVLEDLL SSFENVKNDM  300
KCPKLEQVKP SLVARVGKVL FQKSPSVNME SIRNNLDTEI LKQWKRLFYT NLPVSYKENI  360
LKKVVPNIGV DFEEEKDVYQ VKLSDSTRPD SILSCKCSVM KEHGKLQLHK IELNQLRDMV  420
IDISCPNKNL DLRVMLSTKR PVTALSDDEM QSIRDLISSA VLDPDVKGGL RWPLGKESSG  480
DRYKVVGIWH VIANMYTNPS LRLKVRHADR FDFRTSTGEA TWEVSLMLEK VLSKLQEEKV  540
EVSSISEILE ENMRMIWDNF LCSEHFLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-18	MYB family protein