PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1017640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 356aa    MW: 40106 Da    PI: 10.1374
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1017640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1001.4e-31292350259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+vers edp ++++tYegeH+h+
  Pd.00g1017640.m01 292 ADEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERSLEDPAMLVVTYEGEHKHS 350
                        69************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDEVEEANKA AVESCHGVLS HLCQPKGQVH CKNLLAETEE AVFKFKRVVS LLGGGLGHGR  60
VRKLKKFKPP PLPQNIFLDG PNYRLDISTK PLQLLPPTSL ENRRAEKDSK YGSSLQHTHS  120
QKVVLGNPVV DLDMKIKLPL QIPKTKPLQQ YHFLEQKHDH QQEIQRLQLQ PQQLKYQADT  180
MYSGRNRGIN LAFDRSTTRT PSMSSARSFV SCLSMDGGVA NTHCDSFQLI RGLPQPPDRI  240
SQQQRRCNGA GENGTVKCGS GGKCQYPKKR KVRVKRSFKV PAISNKIADI PADEYSWRKY  300
GQKPIKGSPY PRGYYKCSSM RGCPARKHVE RSLEDPAMLV VTYEGEHKHS PSDQLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.12e-69WRKY family protein