PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1017410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 386aa MW: 41896.2 Da PI: 6.5197

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1017410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.3	3.9e-14	181	230	3	52
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++kr rr+ +NRe+ArrsR+RK+a + eLe + +L eN++L k+l Pd.00g1017410.m01 181 DVKRVRRMLSNRESARRSRRRKQAHLSELEAQASQLRVENSSLLKRLTDA 230 68******************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MDRMFSVEEM SDQLWSSSAP PVNEADDDLS KMNRSASEWA FQRNNTPSFS LQPPNVPVDS 60 EEYQAFLKTK LNLACAAVAL SRVKGSLADS QDSAALAGSG SQASNTSHLG SQAPSKGAGY 120 DLSRPHDKNA NAPVGIPSLP ATQHRSAVPV RQATSGSSRE LSDDEDIEGE TAMTENMDPA 180 DVKRVRRMLS NRESARRSRR RKQAHLSELE AQASQLRVEN SSLLKRLTDA DRKYNEAAVD 240 NRVLKADIET LRAKVKMAEE TVKRITGLNM FHAMSEISST GMPPFDGSPS ETSTDAAVPV 300 QHDPNHHFFQ PASDNPTPTH DLRVKHDSAD IPSVENVQQN SAATSADAVG NKMGRTPSLQ 360 RVASLEHLQK RIRGGNPSGP HSNGEQ

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MDRMFSVEEM SDQLWSSSAP PVNEADDDLS KMNRSASEWA FQRNNTPSFS LQPPNVPVDS  60
EEYQAFLKTK LNLACAAVAL SRVKGSLADS QDSAALAGSG SQASNTSHLG SQAPSKGAGY  120
DLSRPHDKNA NAPVGIPSLP ATQHRSAVPV RQATSGSSRE LSDDEDIEGE TAMTENMDPA  180
DVKRVRRMLS NRESARRSRR RKQAHLSELE AQASQLRVEN SSLLKRLTDA DRKYNEAAVD  240
NRVLKADIET LRAKVKMAEE TVKRITGLNM FHAMSEISST GMPPFDGSPS ETSTDAAVPV  300
QHDPNHHFFQ PASDNPTPTH DLRVKHDSAD IPSVENVQQN SAATSADAVG NKMGRTPSLQ  360
RVASLEHLQK RIRGGNPSGP HSNGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	203	RRSRRRKQ
2	198	203	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.1	1e-69	bZIP family protein