PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 319aa    MW: 34645.3 Da    PI: 5.8244
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.24.9e-30156209155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Pd.00g101640.m01 156 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 209
                       59*******************.********************************8 PP
2Myb_DNA-binding48.42.2e-15158208148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
  Pd.00g101640.m01 158 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 208
                       789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGEEVRMSEY EGGGSGGDDC DDETRVLEWE AGLPSADDLT PLSQPLIPIE LASAFSISPE  60
PCRTTLDVNR ASQKTVSTLR GAAHSQGFSS NYKSFDENRS DDVEPMVVEV DENDRYGNAG  120
SDSRKSRKID CTEEADSALR TENFSADDTS ARTLKRPRLV WTPQLHKRFV DVVAHLGIKN  180
AVPKTIMQLM NVEGLTRENV ASHLQKYRLY LKRMQGLSGD VGPSSSDQLF ASTPVPQSLH  240
QESGGGSGQA GQSHGHGNGQ FSFSMPYPPN MMPMPVLGLT HGHGHGHMGM PGGGYHGFES  300
HHYNMGSMVS YPHGAPNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.27e-79G2-like family protein