PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1016070.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 343aa MW: 38674.2 Da PI: 5.3245 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.4e-13 | 146 | 197 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ Pd.00g1016070.m01 146 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 197 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MALDAVVFPQ DPFSCATNKD LYSYWSSFDD DHHNFGFDND QDHHDQLQHQ ASLDFLGYQT 60 DHNPPNYGTN YYSSAPLNSM VPHFNELQLS NPNPDVSDTT SPTDDQPEFH QLPLDHTITM 120 ADSMPSTRAK RRRAKSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPDSYVQRG 180 DQASIIGGAI NFVKELEQEV HFLGTQKPNN GVPFSQFFTF PQYSTRSSGD HDSAAAAMAE 240 LPLMECKLSN IAADIEVTMV ESHASLKVRA KRIPKQLLKI VSGLHGMHLT ILHLNVVTAD 300 DVVLYSLSLK VEDECTLASV DEIATAVHQM LATIQEEAML NLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 147 | 158 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 2e-68 | bHLH family protein |