PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1015660.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1168aa MW: 130473 Da PI: 9.8678 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.2 | 3.8e-08 | 45 | 81 | 3 | 41 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E e+++da +++G++ W+++a+ + +R+ +++ Pd.00g1015660.m02 45 EWSKGELERFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 81 7*****************99.*********.***98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1168 aa Download sequence |
MAPTKKSKSV KRYATVNEAS PEKYGGGSNK KKQRKRKLSD KLGPEWSKGE LERFYDAYRK 60 YGKDWRKVAA AVRNRSIEMV EALYNMNRAY LSLPEGTASV VGLKAMMTDH YNVMEGSDSE 120 RESNDALGFS RKLQKRKLGK DQLSASKDVF QSHSNASHEG CLSLLKRRRL DGGQPRAVGK 180 RTPRFPVSYA YKKDDRDTYV SPIKKGRRSE GDNDDEVAHV AALLTEASQR GGSPQISQTP 240 YRRPVHVKSS SVQSSERMHP PRGKARANLR DPSMEEDWLE GSIGSKGAET GDYARDSLEG 300 VGTVEINWKG KKFYGKKEKA KDIGNHQFDD GGEACSGTEE GLNVSSRGKD DIEVSNTKGE 360 RFSPQGQRKR SKKLYFGDES SCLDALQTLA DLSLMMPEST MESGSSVQLK EEGTNLDVED 420 KFSVPEATST SQSRNKNKIP SAKHRVPFAI SGVEGTNSKK SKLGREPAFD TTAVSESEQQ 480 LQSTTKTWKR KRKSSVSKIS NADAPIDSNI NEPLKIEAFG EEENKPVTKG KRTNQSSTPS 540 KQWKSTRSLE GSLNSDYRRT GTDLTVTTAQ APTSNHVNLP TKRISRRKMY IPRTLHPKEK 600 SSEKKIKNQL NIRSSSAQDR ALYLKEKTSC CLSSDLVRRW CTFEWFYSAL DYPWFAKREF 660 EEYLNHVGLG HIPRLTRVEW GVIRSSLGKP RRFSEHFLHE EREKLKQYRE SVRKHYAELR 720 TGDREGLPTD LARPLSVGQR VIALHPKTRE VHDGSVLTVD HDKCRVQFDR PDIGVEFVMD 780 VDCMPLNPLD NMPEALRRQN FAFEKFSLTS KEANTNGNLN FGGPHFEKAT SPMNTSVKQG 840 KGDSNHTTSQ PKAASADIDR AQAQQSTYSQ PGMVVAHNQA RDADIRALSE LTRALDKKEA 900 LLMELRNTNN NILENQNSGE CSLKDSEPFK KHYATVLVQL KEASGQVSSA LLNLRQRNTY 960 PANSLPPWLK QPANSTVYGG LPSSFDSSIS QESGSSVAEI VEVSRSKAHM MVNAAIQAMS 1020 SRKGGEDAYV RIREALDSID NQHLPSDSRL SLNRSQEQVN GNLGHRNQLI SSTSDPNFTS 1080 DSPGPKPNTD TEKTEAQVLS DVISACVMAV HMIQTCTERQ YPPAVVAQVL DYAVTRLHPR 1140 CPQNVGIYRE IQMCMGRIKT QILALVPT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 38 | KKKQRKRKL |
2 | 31 | 39 | KKKQRKRKL |
3 | 131 | 139 | KKKQRKRKL |
4 | 166 | 170 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |