PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1013950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C3H | ||||||||
Protein Properties | Length: 150aa MW: 16878 Da PI: 7.4035 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 35.2 | 2e-11 | 58 | 79 | 6 | 27 |
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C++f +tG+C+yGd+C++ H++ Pd.00g1013950.m01 58 CNRFVKTGFCPYGDSCRYLHPK 79 ********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MPLGKYYCEY CDKEFQDTPS ARRRHLQGLQ HLRAKAQWYD SFKDPSHAYT ESLTKGVCNR 60 FVKTGFCPYG DSCRYLHPKN NQQNMVTQGA PGLIDNNQSS TFQENQLVGG SSLPDVVVRD 120 SMGMSWGNLP PSLMPPPEGG YPPLPFVDWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 7e-28 | C3H family protein |