PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1013320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 386aa    MW: 42774.5 Da    PI: 6.0495
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1013320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.52.8e-128143732374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y++lpps  + +++++ ++a+++f+ +sP++kf
  Pd.00g1013320.m01  14 LTLLLQCAEAVSADNFDEATKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYASLPPSYVPISHTQKMVSAFQVFNGISPFVKF 105
                        579***************************************************************************************** PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                        sh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fA++lg+pfef + va++
  Pd.00g1013320.m01 106 SHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFADKLGLPFEFFP-VAEK 192
                        ********************************************************....***************************.7*** PP

               GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        + +l++e+L+++++Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a++++
  Pd.00g1013320.m01 193 VGSLDPERLNISKREAVAVHWLQ--HSLYDVTGSDSN----TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGE 277
                        **********************9..999999999999....**********************.899************************* PP

               GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                        eseer++vE++ll+rei+nv+a  g +r  + + +++Wre+++++GF+ ++l  +aa+qa lll +++sdgy++ e++g+l lgWkd  L++
  Pd.00g1013320.m01 278 ESEERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FHNWREKFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLT 368
                        ***************************888776.********************************************************** PP

               GRAS 370 vSaWr 374
                        +SaWr
  Pd.00g1013320.m01 369 ASAWR 373
                        ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MRQQKRDEEG LHLLTLLLQC AEAVSADNFD EATKILLEIS ELSTPFGTSA QRVAAYFSEA  60
MSARLVSSCL GIYASLPPSY VPISHTQKMV SAFQVFNGIS PFVKFSHFTA NQAIQEAFER  120
EDRVHIVDLD IMQGLQWPGL FHILASRPGG PPYVRLTGLG TSMEALEATG KRLSDFADKL  180
GLPFEFFPVA EKVGSLDPER LNISKREAVA VHWLQHSLYD VTGSDSNTLW LLQRLAPKVV  240
TVVEQDLSHA GSFLGRFVEA IHYYSALFDS LGASYGEESE ERHVVEQQLL SREIRNVLAV  300
GGPSRSGEVK FHNWREKFQQ SGFRGISLAG NAATQATLLL GMFPSDGYTL VEDNGTLKLG  360
WKDLCLLTAS AWRPPFHATT NPNLHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein