PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1012640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 230aa MW: 25765.5 Da PI: 7.1982 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 39.1 | 1.5e-12 | 108 | 142 | 2 | 34 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 dDg++WrKYGqK ++++++pr Y + + +C + Pd.00g1012640.m01 108 DDGHAWRKYGQKAIHNAKHPRDYLKASELilDCAS 142 8************************9987778865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MELSWPESVL SNRERVMEEL IQGRELASQL RREADGEIVS GDQIQGNSSG GGSADSSSWD 60 ANHAIIKSED FHEEISCKSA STLKDRRGSY KRRKTTHSWT RDTPALTDDG HAWRKYGQKA 120 IHNAKHPRDY LKASELILDC ASPRESSSFI RFGDIKQDHP FFSSFTSVKK EVVIKEEKPQ 180 PSDDHMMASH HHNHSSSGDY KVSPHPTAFK SSCPLSGLSS TIDPYRVLAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 1e-09 | WRKY family protein |