PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1012630.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 28431.3 Da PI: 4.5242 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.2 | 2.5e-11 | 104 | 138 | 2 | 34 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 dDg+ WrKYGqK + +s+++r Y + + +C++ Pd.00g1012630.m01 104 DDGHGWRKYGQKRILNSKHSRDYLKASELllDCTS 138 8************************9987778876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEWSWPESVL SNGERVKEEL MQGRELAESD EEIVSGDQIQ GISGGGGSAD SSSWDANHTA 60 AVIKSEDFYE ESCKSTSTFK DGRGSYKRRK TSHCWTRDTP ALTDDGHGWR KYGQKRILNS 120 KHSRDYLKAS ELLLDCTSPR ESSNLIRFGD TKQDHPFFSF FTSVKKEELV FKEELIIKEE 180 IPPTSDDRVI TSHDNHSWLC DYLVSPDLTM FESSGPLNGF SSTLDEFDHE DVISRLMMGS 240 FDLDEVLQYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 6e-08 | WRKY family protein |