PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1012620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 272aa    MW: 30940.3 Da    PI: 6.008
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1012620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.72e-12124160236
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EE CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkk 36 
                        +Dg++WrKYGqK ++++++pr Y + +    +C++ +
  Pd.00g1012620.m01 124 EDGHAWRKYGQKLIRNAKHPRDYLKTSELvlDCTSSR 160
                        7************************998888998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEELIQGREV ASGQLSRVIN LHNNRSLTVN GDHNHDLGSG DDEGFVNKML GSFSNTPFIS  60
KGKKMKEFHH HDDQELISDQ IIQCEASHEE TCKSVSTSST DSRGSYKKRK TCHSLIKDSP  120
VLTEDGHAWR KYGQKLIRNA KHPRDYLKTS ELVLDCTSSR ESSKFIRFDD TNLSSKQEHP  180
FFSSFKSLKG EECFKEETMP SDYMTTQHHN QLALSDYLVS PPDLPAFASP ELMSGFASAN  240
IAQLDEDAIY RKMAGFNYDD FAFDEFLQHE LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-07WRKY family protein