PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1010440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 306aa    MW: 34662.5 Da    PI: 8.8055
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1010440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.11.9e-082872345
                       SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                        WT+eE +++ +a +++ ++   +W ++a++++ g+t  +++  + 
  Pd.00g1010440.m01 28 EWTAEENKQFENALALYDKDtpdRWFKVAARIP-GKTVGDVIKQYK 72
                       6********************************.****99988775 PP
2Myb_DNA-binding47.25e-15135179347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
  Pd.00g1010440.m01 135 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 179
                        8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MYRGIGILSP TSYLENSNWL FQESNGTEWT AEENKQFENA LALYDKDTPD RWFKVAARIP  60
GKTVGDVIKQ YKELEEDVSD IEAGLIPIPG YTSNSFTLEW VNNQGFDGLK QFYGVGGKKG  120
TSTRPADQER KKGVPWTEEE HRQFLMGLKK YGKGDWRNIS RNFVTTRTPT QVASHAQKYF  180
IRQLTGGKDK RRSSIHDITT VNLQDNKPPS PDSKSPPSSD HSSTVVQSQQ HQKVTGMSEH  240
FDWKSPNEGQ PMVFNSANGS TFMGPFCGIS SYVPKLEEQN FLSGNLHGSQ LGHYNARFQM  300
QSMRYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-121MYB family protein