PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1009750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 583aa MW: 64834.1 Da PI: 7.4254

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1009750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	375	412	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + Pd.00g1009750.m01 375 FEHflHPYPTDSDKLMLAKQTGLSRSQVSNWFINARVR 412 554459******************************88 PP
2	BELL	108.9	3.1e-35	244	312	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kk++L+s+l+eV++rYkqy++q+q+v+ sFe vaglg+a+pY++lA ka++rhF+cLk+ai++q+ Pd.00g1009750.m01 244 ESRRKKSRLISMLDEVYRRYKQYYQQMQAVVTSFEYVAGLGNAAPYANLAIKAMTRHFKCLKNAITDQL 312 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MAEGFEPYHV PQQSRREKLR VLAGQAHPGC LQPDSPPPPH HHLHPASPVK PEGQVHHHHH 60 PLMGFVSNSS SSSSASTFRN HLNYLDPQPS SINFPINPTS IHDINANPFL YPPQNLQTLR 120 DFDHQADYGH DQVVRYGASA VNYSSLNSGV NVASASNENI GSRSSVPLGP FTGYASILKG 180 SRFLKPAQQL LEEFCDVGNR EIYTAKVLAD SSSFFDPPSI ESFSPTHVVD DDDDPLSVGG 240 DGGESRRKKS RLISMLDEVY RRYKQYYQQM QAVVTSFEYV AGLGNAAPYA NLAIKAMTRH 300 FKCLKNAITD QLQFRNRDAT QLSHGKDESQ MLRNTRGFYN QRSIHNSDFV EHQPVWRPQR 360 GLPERAVTVL RAWLFEHFLH PYPTDSDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE 420 IHTLETRQAQ KTSQRGDQSA NRSIDDHLPS PNSLASENPS TTTHRVQDSL SKRTRNELPD 480 HITMGSSTDQ LNLSCNNLPS HMHVGHVGMN MAGGSSSGVS LTLGLHQNNG IGLSEPFPIN 540 AAQRFGIGLD GNNDGYAMGG FESQNRHFGR DVMGGQLLHD FVG

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MAEGFEPYHV PQQSRREKLR VLAGQAHPGC LQPDSPPPPH HHLHPASPVK PEGQVHHHHH  60
PLMGFVSNSS SSSSASTFRN HLNYLDPQPS SINFPINPTS IHDINANPFL YPPQNLQTLR  120
DFDHQADYGH DQVVRYGASA VNYSSLNSGV NVASASNENI GSRSSVPLGP FTGYASILKG  180
SRFLKPAQQL LEEFCDVGNR EIYTAKVLAD SSSFFDPPSI ESFSPTHVVD DDDDPLSVGG  240
DGGESRRKKS RLISMLDEVY RRYKQYYQQM QAVVTSFEYV AGLGNAAPYA NLAIKAMTRH  300
FKCLKNAITD QLQFRNRDAT QLSHGKDESQ MLRNTRGFYN QRSIHNSDFV EHQPVWRPQR  360
GLPERAVTVL RAWLFEHFLH PYPTDSDKLM LAKQTGLSRS QVSNWFINAR VRLWKPMVEE  420
IHTLETRQAQ KTSQRGDQSA NRSIDDHLPS PNSLASENPS TTTHRVQDSL SKRTRNELPD  480
HITMGSSTDQ LNLSCNNLPS HMHVGHVGMN MAGGSSSGVS LTLGLHQNNG IGLSEPFPIN  540
AAQRFGIGLD GNNDGYAMGG FESQNRHFGR DVMGGQLLHD FVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	2e-92	TALE family protein