PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1008930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 314aa MW: 33468.1 Da PI: 9.2896

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1008930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.4e-39	92	151	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ Pd.00g1008930.m01 92 EPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 151 6789*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MVFSSIPAYL DPSNWQQQPN HHHLTGSTSN NSNINNSNNS NINNSNNNSH LLPPPPPPSN 60 PHGSGSGAGG VGSIRPGSMA DRARMANIPL PEPALKCPRC ESTNTKFCYF NNYSLTQPRH 120 FCKTCRRYWT RGGALRNVPV GGGCRRNKRS KGSSSSASKS PVSSSDRPTG SPGSSGQANI 180 GLNNTASTAD NNIMMSPQIP PLRFMSPFAT DMALNYGMNV NNYGGGGGVG DMNSFHQMGG 240 GLGSIGGSLF NFQQQTPSFP FLTAGGGLDP SPAAAGMMFE NSGVEVTGYN QICPVNEMKE 300 DWERWPMGFV RRES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-44	Dof family protein