PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1008430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 862aa MW: 95854.8 Da PI: 6.4342

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1008430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.8	3.2e-11	114	135	2	23
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 dDgy+WrKYGqK++k+s++pr Pd.00g1008430.m01 114 DDGYKWRKYGQKSIKNSPNPRT 135 8********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
MEYAMGATWS DGAEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP 60 TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR 120 KYGQKSIKNS PNPRTTFLHE TVPLGNACIS GVDGELGLLR GYLTYNGAGK QLVSNTYLSN 180 FKSFLTNPRI RRFFSSQGHE KKNYENYYPK NKKEIPKGNG QKSGSKEGSN AGDQGNTREL 240 FIPWHQIIGP IMFLGFVFTS LLLNPQQAKE ISFQEFKNKL LEPGLVDHIE VANKSVAKVY 300 VRSSPHDKKQ SGDDAVKGPA DGSSSGGNKY YFNIGSVESF EEKLEEAQEA LGFDRHDFVP 360 VIYVSQINWF QELMRYGPTA LLLGALWFMS RKMPSIGGPG GKGGRGIFNI GKAQITKLDK 420 NAKNKVFFKD VAGCDEAKQE IMEFVHFLKN PKKYEEVRSL FQEARQCAPS IIFIDEIDAI 480 GRARGRGGFS GGHDERESTL NQLLVEMDGF GTTAGVVVLA GTNRPDILDK ALLRPGRFDR 540 QITIDKPDIK GRNQIFQIYL NKLKLDLEPS YYSERLAALT PGFAGADIAN VCNEAALIAA 600 RNESPKITMK HFEAAIDRVI GGLEKKNKVV SKLERRTVAY HESGHAVAGW FLEHAEPLLK 660 VTIVPRGTAA LGFAQYVPNE NLLMTKEQLF DMTCMTLGGR AAEQVLLGKI STGAQNDLEK 720 VTKMTYAQVA VYGFSDKVGL LSFPQRDDAF EMAKPYSSKT GAIIDSEVRE WVAKAYVRTI 780 ELIEEHKEQV GQIAELLLEK EVLHQDDLVR VLGERPFKSN EPTNYDRFKE GFHEDKEPTE 840 TTEGGNVDDG RSPPIQSDVV PA

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

MEYAMGATWS DGAEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP  60
TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR  120
KYGQKSIKNS PNPRTTFLHE TVPLGNACIS GVDGELGLLR GYLTYNGAGK QLVSNTYLSN  180
FKSFLTNPRI RRFFSSQGHE KKNYENYYPK NKKEIPKGNG QKSGSKEGSN AGDQGNTREL  240
FIPWHQIIGP IMFLGFVFTS LLLNPQQAKE ISFQEFKNKL LEPGLVDHIE VANKSVAKVY  300
VRSSPHDKKQ SGDDAVKGPA DGSSSGGNKY YFNIGSVESF EEKLEEAQEA LGFDRHDFVP  360
VIYVSQINWF QELMRYGPTA LLLGALWFMS RKMPSIGGPG GKGGRGIFNI GKAQITKLDK  420
NAKNKVFFKD VAGCDEAKQE IMEFVHFLKN PKKYEEVRSL FQEARQCAPS IIFIDEIDAI  480
GRARGRGGFS GGHDERESTL NQLLVEMDGF GTTAGVVVLA GTNRPDILDK ALLRPGRFDR  540
QITIDKPDIK GRNQIFQIYL NKLKLDLEPS YYSERLAALT PGFAGADIAN VCNEAALIAA  600
RNESPKITMK HFEAAIDRVI GGLEKKNKVV SKLERRTVAY HESGHAVAGW FLEHAEPLLK  660
VTIVPRGTAA LGFAQYVPNE NLLMTKEQLF DMTCMTLGGR AAEQVLLGKI STGAQNDLEK  720
VTKMTYAQVA VYGFSDKVGL LSFPQRDDAF EMAKPYSSKT GAIIDSEVRE WVAKAYVRTI  780
ELIEEHKEQV GQIAELLLEK EVLHQDDLVR VLGERPFKSN EPTNYDRFKE GFHEDKEPTE  840
TTEGGNVDDG RSPPIQSDVV PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	2e-29	WRKY family protein