PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1007560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 412aa MW: 45365.8 Da PI: 6.2567

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1007560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.4e-17	66	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + Pd.00g1007560.m01 66 KGPWSPEEDAILSRLVSKFGARNWSLIARGID-GRSGKSCRLRWCNQ 111 79****************************.*********985 PP
2	Myb_DNA-binding	56	9.1e-18	118	162	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd+ ++ a++ +G++ W++Iar ++ gRt++ +k++w++ Pd.00g1007560.m01 118 RKPFTDEEDQMIIAAHAFHGNK-WAAIARLLP-GRTDNAIKNHWNST 162 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MTKSEEKKQK ILGAVFCRVK NSTLALALSV KFVEVEDGGD SGEEATQAVA GGGGESHRKS 60 GRDRVKGPWS PEEDAILSRL VSKFGARNWS LIARGIDGRS GKSCRLRWCN QLDPSVKRKP 120 FTDEEDQMII AAHAFHGNKW AAIARLLPGR TDNAIKNHWN STLRRRCMDP DKIKLESGNT 180 VEDVSLDKTK ASSEETFSYG DVNSSKSMEG REVSSLEHMD CQYEDKGSTE GQFSHEVKEQ 240 PTLCRPAACI SAFSVYNHSD NQETGVSFPR LIPVQGPLVQ VSKLDVNISK LLDGVYGERS 300 VPDQCGHGCC CANGKNAQNS LLGPEFVDFS EPPSFPSFEL AAIATDISNL AWIKSGLENS 360 SVRAMGDAAD RTVPHESQGQ MGYFEESRMN NLFRFEERND RLMGMKTNVL ST

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MTKSEEKKQK ILGAVFCRVK NSTLALALSV KFVEVEDGGD SGEEATQAVA GGGGESHRKS  60
GRDRVKGPWS PEEDAILSRL VSKFGARNWS LIARGIDGRS GKSCRLRWCN QLDPSVKRKP  120
FTDEEDQMII AAHAFHGNKW AAIARLLPGR TDNAIKNHWN STLRRRCMDP DKIKLESGNT  180
VEDVSLDKTK ASSEETFSYG DVNSSKSMEG REVSSLEHMD CQYEDKGSTE GQFSHEVKEQ  240
PTLCRPAACI SAFSVYNHSD NQETGVSFPR LIPVQGPLVQ VSKLDVNISK LLDGVYGERS  300
VPDQCGHGCC CANGKNAQNS LLGPEFVDFS EPPSFPSFEL AAIATDISNL AWIKSGLENS  360
SVRAMGDAAD RTVPHESQGQ MGYFEESRMN NLFRFEERND RLMGMKTNVL ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-109	MYB family protein