PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1005530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 279aa MW: 31979.8 Da PI: 7.8163

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1005530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.6e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v+++G g+W+ +a++ g++R++k+c++rw +yl Pd.00g1005530.m01 16 KGPWTPEEDKLLNEYVNLHGEGRWSCVAKCAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	47.8	3.3e-15	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++ +++G++ W+tIar+++ gRt++++k++w+++ Pd.00g1005530.m01 69 RGHITPQEEGIIIELYALWGNK-WSTIARYLP-GRTDNEIKNFWRTH 113 6778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MVTMMGWGFA EQGWRKGPWT PEEDKLLNEY VNLHGEGRWS CVAKCAGLNR SGKSCRLRWV 60 NYLRPGLKRG HITPQEEGII IELYALWGNK WSTIARYLPG RTDNEIKNFW RTHFKKKEKC 120 TQKQEKRKAQ ILLAKQQQQE QQQQQLQEDQ NLKIRATPQS EASQGENINM TTDHEAQARQ 180 ENNMDLISSS YPNLEGDQYC LPALMNQGSV GSWADILGEE GLFMGRLWNL DDEHVNGRMD 240 RNTSLSQCNK SAMQNQAAVT AFSSGGDYSN TFYNGGYIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	6e-70	MYB family protein