PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g100540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 271aa MW: 30505.4 Da PI: 10.0858 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.7e-14 | 100 | 144 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky Pd.00g100540.m01 100 PWTEDEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 144 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MFENALAVHD KDTPDRWLKV AAMIPGKTAM DVMKQYEELE VDVGKIEAGL VPIPGYSASP 60 FTLEWVNRHG YDGFKQSYGL GGKRSSSARP ADHERKKGVP WTEDEHKLFL LGLKKYGKGD 120 WRNISRNFVV TRTPTQVASH AQKYFIRQLS GGKDKRRASI HDITTVNLND MRTPSPDNKR 180 PLSPELSVPQ QPNSAATART PFQWHHQQGG GANMAFNQAH RNMFMSHPYG ISSYGLKMQG 240 QDLHKGAANN SYYGPQNMVF QMQSAQHYPY G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-79 | MYB family protein |