PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1000630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 282aa    MW: 31573.8 Da    PI: 6.6457
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1000630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.1e-10195238755
                        HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        ++ ++RR+ri +++  L+el+P+ +      K++ +++LekA+ Y+k Lq
  Pd.00g1000630.m01 195 IAAKNRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 238
                        5679*******************77......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MPHDSCTHES PQVSSDLSNG FVFRATSNYH QPDHQVAHSV INFKSSGYNS FFQNSESLLS  60
FEKNSKQNIL KTRNDKDEHF NCDDDLHHGN YQWNHTASVS DPLLSGDFNC FQTASNYSSM  120
PNTSKDDHGD EAYGWLYSEA TVVADGFQEP ESQEGFHKRP HTGEAMQPLK KQCTNSGTKK  180
PKPKSSSPTK DPQSIAAKNR RERISERLKI LQELVPNGCK VDLVTMLEKA ISYVKFLQLQ  240
VKVLATDEFW PVQGGKAPDI SQVKEAIDAI LSSQRDTSSS SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.12e-59bHLH family protein