PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g096530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 331aa    MW: 35651.6 Da    PI: 9.872
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g096530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-1395139347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Pd.00g096530.m01  95 AWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 139
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTE ASGGGGGAAA SAENGIMLFG VRVTEGNEFR KSASMNNLSQ  60
YEQNIQADSN GDAGYASDDV VHASGHRRER KRGVAWTEEE HRLFLLGLQK VGKGDWRGIS  120
RNFVKTRTPT QVASHAQKYF LRRNNHNRRR RRSSLFDITT DTPLMDEDIG QQKHQETATA  180
LPYPQQPQPQ MNLGRHILGG FPVSTFPMAL SPGVLPVSGE TSSVDNLTSS IGPNLNLQND  240
VPQQAKGAPT TLSAKLIRPI PLHPVPPPPS SKMAGLNLNN KYTPPPTRDP SPLSLKLATT  300
SSEEQSPNTA SSHSSAFQGM SSGSDSIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.28e-72MYB_related family protein