PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g095610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 503aa MW: 55825 Da PI: 8.3899

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g095610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.7	2.5e-28	165	218	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pd.00g095610.m01 165 KPRVVWSLELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 218 79*****************.******************************8 PP
2	Myb_DNA-binding	39.4	1.4e-12	167	217	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +++t++++ s++qky+ Pd.00g095610.m01 167 RVVWSLELHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 217 678******************************99***********7 PP
3	Response_reg	78.6	2.2e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ ++ll +l++ +y +v++++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + Pd.00g095610.m01 20 VLAVDDDPICLKLLDALLRRCKY-HVTTTSQAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGIT 110 799******************.***********888888***************87754.558**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +e+l + Pd.00g095610.m01 111 HGACDYLLKPVRIEQLKN 128 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MTVEGVLDEP RDQFPIGMRV LAVDDDPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP 120 VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNGEGG PGSKKPRVVW SLELHRKFVA 180 AVNQLGIDKA VPKKILDLMN VEKLTRENVA SHLQKYRLYL KRISRVANQQ ANMVAALGTS 240 DSSYLRMTSV NGVGNFHPLT GPGQFHNNAF RSFPPSGMVG RLNTPAGLGL HCLPSSGMFQ 300 LSHAQNPSNS INDQPLIFPG NRNGNILPAP LELDQQHGTE AACVADFSAA INVFCIKGLL 360 KDSRFGLPIQ ASAISNNSGQ TINNDLFQGW DDHKPDSQYP SDVMCTSMNS LMPVNDTVAP 420 FDQNSDSRRP TFQRNMGFNS IGQSNFLDPL LMKYDDVELT QDASLKMRPG YLMDQRKLLG 480 GYNPNNVGSL DELVSAMMKQ ERR

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MTVEGVLDEP RDQFPIGMRV LAVDDDPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP  120
VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNGEGG PGSKKPRVVW SLELHRKFVA  180
AVNQLGIDKA VPKKILDLMN VEKLTRENVA SHLQKYRLYL KRISRVANQQ ANMVAALGTS  240
DSSYLRMTSV NGVGNFHPLT GPGQFHNNAF RSFPPSGMVG RLNTPAGLGL HCLPSSGMFQ  300
LSHAQNPSNS INDQPLIFPG NRNGNILPAP LELDQQHGTE AACVADFSAA INVFCIKGLL  360
KDSRFGLPIQ ASAISNNSGQ TINNDLFQGW DDHKPDSQYP SDVMCTSMNS LMPVNDTVAP  420
FDQNSDSRRP TFQRNMGFNS IGQSNFLDPL LMKYDDVELT QDASLKMRPG YLMDQRKLLG  480
GYNPNNVGSL DELVSAMMKQ ERR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	226	RLYLKRISRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-130	ARR-B family protein