PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g093540.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 445aa MW: 47718.3 Da PI: 7.606

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g093540.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.9	1e-35	67	192	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksa 94 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++++s + + ++ s++ k+a+ + Pd.00g093540.m01 67 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLNNSFP----DTPKQLSDE-----KRASCE 150 689***********************************************************44444....222233333.....222222 PP TCP 95 a..kskksqksaasalnlakesrakarararertrekmrikn 134 + ++ ++ + + ++ + r kar+rarer ++++ +++ Pd.00g093540.m01 151 HgnSETSKGSGLSLSRSEIRVNRVKARERARERAAKDKEKES 192 21133333333444445555888*******8877766654 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MEVEEIQAQA CKFPRIGNGS SRATNPAADD EDQDPSCLGL KRAATADAGN RLRGWHHSRI 60 IRVSRASGGK DRHSKVWTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKAA 120 ADAIAELPSL NNSFPDTPKQ LSDEKRASCE HGNSETSKGS GLSLSRSEIR VNRVKARERA 180 RERAAKDKEK ESNESASHIA HHHQQNSSNL NNSISQSASF TELLTGGIGT NSSNNNNSPT 240 AAAHQQQNHG GGGEPILFHK AAAAGGGGPM DYFSSGLLGL SSSTRTHHSS GFSSQIQLGM 300 NSIPQTMSVV SPFSVSGDHH HNHNPELQHF SFVPDHLIPV TTSSQPGNGG DYNLNFSISS 360 SGGLAGFNRG TLQSNSSSSP SLLPHHLQSS QLGLIAACNI PTATEAGIQT TREKQRTDLV 420 HDQSLAAHLS FFLESEAKEA VATCE

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MEVEEIQAQA CKFPRIGNGS SRATNPAADD EDQDPSCLGL KRAATADAGN RLRGWHHSRI  60
IRVSRASGGK DRHSKVWTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKAA  120
ADAIAELPSL NNSFPDTPKQ LSDEKRASCE HGNSETSKGS GLSLSRSEIR VNRVKARERA  180
RERAAKDKEK ESNESASHIA HHHQQNSSNL NNSISQSASF TELLTGGIGT NSSNNNNSPT  240
AAAHQQQNHG GGGEPILFHK AAAAGGGGPM DYFSSGLLGL SSSTRTHHSS GFSSQIQLGM  300
NSIPQTMSVV SPFSVSGDHH HNHNPELQHF SFVPDHLIPV TTSSQPGNGG DYNLNFSISS  360
SGGLAGFNRG TLQSNSSSSP SLLPHHLQSS QLGLIAACNI PTATEAGIQT TREKQRTDLV  420
HDQSLAAHLS FFLESEAKEA VATCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	4e-49	TCP family protein