PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g090820.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 314aa MW: 34914.9 Da PI: 9.0031 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.2e-14 | 116 | 167 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i+ A+e++k+L+ Pd.00g090820.m01 116 QRMTHIAVERNRRKQMNEHLAILRSLMPDS---YVQRGDQASIVGGAIEFVKELE 167 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MTMALAALTS NEPFNFIIYD TISATPYSFQ DSSGTTSNFI PPDKYFCTST SSMKSDQDTQ 60 IKRALNLEAA AAGGGGRQKQ SSLGVNNNNA QQQQQGRKKR RRKPRVCKNK EEAETQRMTH 120 IAVERNRRKQ MNEHLAILRS LMPDSYVQRG DQASIVGGAI EFVKELEHLL HSLEAQKLQL 180 LHNADVSTST SKLVQTPFAQ LLDCPQYTWS HCPNKFTSKT KAAVADIEVT LIETHANLKI 240 MSRRISPRQL SKLVGGIQSL QLTILHLTVT TMDPFVLYSI SVKIEEGCLL SSVDDIATAI 300 HHMLRVIEEA AALC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RKKRRRK |
2 | 97 | 104 | RKKRRRKP |
3 | 98 | 103 | KKRRRK |
4 | 117 | 128 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 6e-70 | bHLH family protein |