PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g090440.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 510aa MW: 55368.3 Da PI: 4.3845

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g090440.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	80	3.6e-25	41	125	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SF gF+kv+ ++ weF+++ F +g+k+ll Pd.00g090440.m01 41 FLSKTYDMVDDPATDQVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSF-------GFRKVDPDR---------WEFANEGFLRGQKHLL 117 9******************999***********************9.......9*999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g090440.m01 118 KSINRRKP 125 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW 60 SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFGFRKVDPD RWEFANEGFL RGQKHLLKSI 120 NRRKPAHGHS HQQPQPSQGQ NSVAACVEVG KFGLEEEVER LKRDKNVLMQ ELIKLRQQQQ 180 STDNQLQAMV QRLQGMEQRQ QQMMSFLAKA VQSPSFLTQF VQQQNESNRR IIEVNKKRRL 240 KQDEGGDSGT PDGQIVKYQP PVNEAAKAML RQIMTTDTSS SRLESFNDTH DNNLTGNGSS 300 SSSSLIDSGS SSSHASGVTL QEVPLTSGLG LSSAISEVQS SRQAANSGTV TRAPFSDINA 360 LVGAQEAQSI PISQAGVIIP ELSQIPEMVP ECLVDIPEEN MAPDAGVGFI ENMASDAGDG 420 FISDILGLDG SMTIDIDSIP PDPDIEALLK NWDQFLQSPE PDEMDSTSAE GVPMGNEEQP 480 STENGWDKTQ HNMDNLTEKM GRLTSDTEGV

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW  60
SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFGFRKVDPD RWEFANEGFL RGQKHLLKSI  120
NRRKPAHGHS HQQPQPSQGQ NSVAACVEVG KFGLEEEVER LKRDKNVLMQ ELIKLRQQQQ  180
STDNQLQAMV QRLQGMEQRQ QQMMSFLAKA VQSPSFLTQF VQQQNESNRR IIEVNKKRRL  240
KQDEGGDSGT PDGQIVKYQP PVNEAAKAML RQIMTTDTSS SRLESFNDTH DNNLTGNGSS  300
SSSSLIDSGS SSSHASGVTL QEVPLTSGLG LSSAISEVQS SRQAANSGTV TRAPFSDINA  360
LVGAQEAQSI PISQAGVIIP ELSQIPEMVP ECLVDIPEEN MAPDAGVGFI ENMASDAGDG  420
FISDILGLDG SMTIDIDSIP PDPDIEALLK NWDQFLQSPE PDEMDSTSAE GVPMGNEEQP  480
STENGWDKTQ HNMDNLTEKM GRLTSDTEGV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	242	NKKRRLKQ
2	236	241	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-120	HSF family protein