PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g086910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 204aa    MW: 22225.9 Da    PI: 6.4995
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g086910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26060.35.4e-194862097
            DUF260 20 pyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
                      +++     p++q++++ +v+k+FG++ + ++++a++e++r+++++sl++eA  r+ +Pv+Ga+g++l+++++++q+++e++l+
  Pd.00g086910.m01  4 QCLqwiedPQAQAHATVFVAKFFGRAGLFSFINAVSESQRPALFQSLFFEAVGRTINPVNGATGLLLSGKWEVCQAAVETVLR 86
                      55555556999******************************************************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLRQCLQWIE DPQAQAHATV FVAKFFGRAG LFSFINAVSE SQRPALFQSL FFEAVGRTIN  60
PVNGATGLLL SGKWEVCQAA VETVLRGGTL EPLPEYTRDD HQNCVHDHPI RLQRQSTKKK  120
RSSDLAFDDT DDHDVANCQL PDLDLCLTAA GGLTSRTKRG DCRAGTPSSA EESETTTLGS  180
SSSSADHCSG NNLKGTTKLL RLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-50LBD family protein