PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g086480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1014aa MW: 113572 Da PI: 6.8623

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g086480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.5	3.5e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwl++ ei++iL nf+++elt++++ rp+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++f Pd.00g086480.m01 20 QEaKERWLRPAEICEILRNFQNFELTADPPVRPPAGSLFLFDRKALRYFRKDGHHWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNSNF 112 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 qrr+yw+L+++l++ivlvhy++v Pd.00g086480.m01 113 QRRSYWMLDMHLQHIVLVHYRNV 135 *******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1014 aa Download sequence
MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF 60 DRKALRYFRK DGHHWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML 120 DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA 180 SSPNRVDWNG KTLSTEFEDV DSGGDARTSS VAQSMFGSVL HNASLLSQVG GFPESFRDPL 240 SSWYAGPKFA HGAGSSVWNG MDSSTRKERS MHDQNLFVEA PNRADFITHK LTDARLDVDC 300 RVNNVTCEDK LTTEIDVQVA TASSQREAQV SKEHDFNVFH PQVQDYSDPQ VVVNSSNQVE 360 ENSRDGGMRN AESVELKKLD SFGRWMDKEI GVDCDDSLMA SDSGNYWSPL DAENGDKEVS 420 SLSHHMHLDI DSLGPSLSQE QLFSIHDFSP DWAYSETETK VLIVGSFLGS KKHTTETKWG 480 CMFGEIEVSA EVLSNNVIRC QTPLHAPGCV PFYVTCRNRL ACSEVREFEY QEKPIGNTSK 540 DDELRFQIRL AKLLSLDSER KWLECTALDS DKCKLKSSIF SMRNNRESDW ERIDGASVAC 600 KSDHLTHRDV LIQNLLKDRL CEWLVCKLHE GGKGPHVLDN EGQGVLHLTA ALGYEWAMGP 660 IIASGISPNF RDARGRTGLH WASYFGREET VIALLRLGAA PGAVEDPTSA FPGGQTAADL 720 ASSKGHKGIA GYLAEADLTS HLETLTMNEN IVNNVAATIA AEKAIETAEV IATDVVVDEQ 780 YSLKSSLAAV RKSAHAAALI QEAFRTRSFR QRQLTKSGTD VSEVHSHDLI AHRSLKRVQK 840 FAHYEDYLHV AAALKIQQNY HGWKGRKDYL KIRDRIVKIQ AHVRGHQVRK NYKKVVWSVG 900 ILEKVILRWR RKGAGLRGFR VEKAIEDVSS EVKKNDDYEF LSVGRKQKYA GVEKALSRVR 960 SMSRQPEARE QYMRLLSKFE KLKMADGESP ASNQIESSDE RVLDEVLLAL TEGQ

Sequence ? help Back to Top

Protein Sequence Length: 1014 aa Download sequence

MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF  60
DRKALRYFRK DGHHWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML  120
DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA  180
SSPNRVDWNG KTLSTEFEDV DSGGDARTSS VAQSMFGSVL HNASLLSQVG GFPESFRDPL  240
SSWYAGPKFA HGAGSSVWNG MDSSTRKERS MHDQNLFVEA PNRADFITHK LTDARLDVDC  300
RVNNVTCEDK LTTEIDVQVA TASSQREAQV SKEHDFNVFH PQVQDYSDPQ VVVNSSNQVE  360
ENSRDGGMRN AESVELKKLD SFGRWMDKEI GVDCDDSLMA SDSGNYWSPL DAENGDKEVS  420
SLSHHMHLDI DSLGPSLSQE QLFSIHDFSP DWAYSETETK VLIVGSFLGS KKHTTETKWG  480
CMFGEIEVSA EVLSNNVIRC QTPLHAPGCV PFYVTCRNRL ACSEVREFEY QEKPIGNTSK  540
DDELRFQIRL AKLLSLDSER KWLECTALDS DKCKLKSSIF SMRNNRESDW ERIDGASVAC  600
KSDHLTHRDV LIQNLLKDRL CEWLVCKLHE GGKGPHVLDN EGQGVLHLTA ALGYEWAMGP  660
IIASGISPNF RDARGRTGLH WASYFGREET VIALLRLGAA PGAVEDPTSA FPGGQTAADL  720
ASSKGHKGIA GYLAEADLTS HLETLTMNEN IVNNVAATIA AEKAIETAEV IATDVVVDEQ  780
YSLKSSLAAV RKSAHAAALI QEAFRTRSFR QRQLTKSGTD VSEVHSHDLI AHRSLKRVQK  840
FAHYEDYLHV AAALKIQQNY HGWKGRKDYL KIRDRIVKIQ AHVRGHQVRK NYKKVVWSVG  900
ILEKVILRWR RKGAGLRGFR VEKAIEDVSS EVKKNDDYEF LSVGRKQKYA GVEKALSRVR  960
SMSRQPEARE QYMRLLSKFE KLKMADGESP ASNQIESSDE RVLDEVLLAL TEGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-163	CAMTA family protein