PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g086270.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 970aa MW: 107351 Da PI: 6.5642

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g086270.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.9	4.4e-41	142	219	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g086270.m02 142 VCQVEDCKADLSNAKDYHRRHKVCDMHSKASTALVGNAMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 219 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 970 aa Download sequence
MEAEFGGKAH SYYGMKAVGK KSFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE 60 TPSNAGLSNS SSSGLDNISP GNEKGKRELE KRRRGVFVEN EVHDEAGSLN LNLGGQAYPI 120 MEGEVQTGKK TKIVGTTSNR AVCQVEDCKA DLSNAKDYHR RHKVCDMHSK ASTALVGNAM 180 QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD TTANGGSLND ERGSSYLLIS 240 LLSILSNMHS TSSDQTKDQD LLSHLLRSLA NLAGTADGRN ISTLLQGSQG LFNSGTSVQI 300 TKVPDMDDGV NLEDLRPVGQ CSVVPASDML ERRISSVDDP GSLQVLSGLQ ATEPLPSRDS 360 SESKSVTPEA TSRRFQLNGI DLNNTYDDSQ DYLENLGNSH VPASPGTASL GFSSWMQRDS 420 HKSSPPQTSG NSDLTSTQSP SSSSGEAQSR TDRIVFKLFG KDPNDLPFIL RSQILDWLSH 480 SPTDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSSQVV LDTPLPLKSD KSCRISYIKP 540 IAVSVSERAQ FVVKGFNLSH SATRLLCALE GKYLVQETCY DMMDGVHTTV EHDELQCLKF 600 SCSIPDVTGR GFIEVEDHGL SSSFFPFIVA EQEVCSEICM LEGEIEVAES ADAEKLEAKN 660 QALDFIHELG WLLHRSRAKF RLGHSDPNLD LFPFSRFRLL MEFSIEHDWC VVVKKLLGIL 720 FEGTVDAGEH TSVEFALLDM SLLHRAVRRN CRSMVEFLLK FIPNQGLTGS EQKQQVDRDG 780 NSFLFKPDAV GPMGLTPLHV AASADGYEHV LDALTDDPGK LGIEAWKNAR DSTGLTPYDY 840 ACLQSRYSYV HLVQRKISKT LESGQVVLDI PGVILDGNGK QKQSEAYKPS RVASLETEKI 900 EMKAILRHCK LCAQKPAYGN TRSLVYRPAM LSMVAVAAVC VCVALLFKST PEVLFVFQPF 960 RWELLKFGSS

Sequence ? help Back to Top

Protein Sequence Length: 970 aa Download sequence

MEAEFGGKAH SYYGMKAVGK KSFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE  60
TPSNAGLSNS SSSGLDNISP GNEKGKRELE KRRRGVFVEN EVHDEAGSLN LNLGGQAYPI  120
MEGEVQTGKK TKIVGTTSNR AVCQVEDCKA DLSNAKDYHR RHKVCDMHSK ASTALVGNAM  180
QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD TTANGGSLND ERGSSYLLIS  240
LLSILSNMHS TSSDQTKDQD LLSHLLRSLA NLAGTADGRN ISTLLQGSQG LFNSGTSVQI  300
TKVPDMDDGV NLEDLRPVGQ CSVVPASDML ERRISSVDDP GSLQVLSGLQ ATEPLPSRDS  360
SESKSVTPEA TSRRFQLNGI DLNNTYDDSQ DYLENLGNSH VPASPGTASL GFSSWMQRDS  420
HKSSPPQTSG NSDLTSTQSP SSSSGEAQSR TDRIVFKLFG KDPNDLPFIL RSQILDWLSH  480
SPTDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSSQVV LDTPLPLKSD KSCRISYIKP  540
IAVSVSERAQ FVVKGFNLSH SATRLLCALE GKYLVQETCY DMMDGVHTTV EHDELQCLKF  600
SCSIPDVTGR GFIEVEDHGL SSSFFPFIVA EQEVCSEICM LEGEIEVAES ADAEKLEAKN  660
QALDFIHELG WLLHRSRAKF RLGHSDPNLD LFPFSRFRLL MEFSIEHDWC VVVKKLLGIL  720
FEGTVDAGEH TSVEFALLDM SLLHRAVRRN CRSMVEFLLK FIPNQGLTGS EQKQQVDRDG  780
NSFLFKPDAV GPMGLTPLHV AASADGYEHV LDALTDDPGK LGIEAWKNAR DSTGLTPYDY  840
ACLQSRYSYV HLVQRKISKT LESGQVVLDI PGVILDGNGK QKQSEAYKPS RVASLETEKI  900
EMKAILRHCK LCAQKPAYGN TRSLVYRPAM LSMVAVAAVC VCVALLFKST PEVLFVFQPF  960
RWELLKFGSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	132	KRRRGVFVENEVHDEAGSLNLNLGGQAYPIMEGEVQTGKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein