PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g086270.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 954aa MW: 105879 Da PI: 6.3607 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131 | 4.3e-41 | 142 | 219 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g086270.m01 142 VCQVEDCKADLSNAKDYHRRHKVCDMHSKASTALVGNAMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 219 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 954 aa Download sequence |
MEAEFGGKAH SYYGMKAVGK KSFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE 60 TPSNAGLSNS SSSGLDNISP GNEKGKRELE KRRRGVFVEN EVHDEAGSLN LNLGGQAYPI 120 MEGEVQTGKK TKIVGTTSNR AVCQVEDCKA DLSNAKDYHR RHKVCDMHSK ASTALVGNAM 180 QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD TTANGGSLND ERGSSYLLIS 240 LLSILSNMHS TSSDQTKDQD LLSHLLRSLA NLAGTADGRN ISTLLQGSQG LFNSGTSVQI 300 TKVPDMDDGV NLEDLRPVGQ CSVVPASDML ERRISSVDDP GSLQVLSGLQ ATEPLPSRDS 360 SESKSVTPEA TSRRFQLNGI DLNNTYDDSQ DYLENLGNSH VPASPGTASL GFSSWMQRDS 420 HKSSPPQTSG NSDLTSTQSP SSSSGEAQSR TDRIVFKLFG KDPNDLPFIL RSQILDWLSH 480 SPTDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSSLKT LLDAADDPFW RTGWVYTRSL 540 YLRGLSLWLL CALEGKYLVQ ETCYDMMDGV HTTVEHDELQ CLKFSCSIPD VTGRGFIEVE 600 DHGLSSSFFP FIVAEQEVCS EICMLEGEIE VAESADAEKL EAKNQALDFI HELGWLLHRS 660 RAKFRLGHSD PNLDLFPFSR FRLLMEFSIE HDWCVVVKKL LGILFEGTVD AGEHTSVEFA 720 LLDMSLLHRA VRRNCRSMVE FLLKFIPNQG LTGSEQKQQV DRDGNSFLFK PDAVGPMGLT 780 PLHVAASADG YEHVLDALTD DPGKLGIEAW KNARDSTGLT PYDYACLQSR YSYVHLVQRK 840 ISKTLESGQV VLDIPGVILD GNGKQKQSEA YKPSRVASLE TEKIEMKAIL RHCKLCAQKP 900 AYGNTRSLVY RPAMLSMVAV AAVCVCVALL FKSTPEVLFV FQPFRWELLK FGSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 91 | 132 | KRRRGVFVENEVHDEAGSLNLNLGGQAYPIMEGEVQTGKKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 0.0 | SBP family protein |