PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g086260.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 1034aa MW: 114888 Da PI: 7.3995

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g086260.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.1e-40	147	224	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g086260.m01 147 VCQVEDCKADLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 224 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1034 aa Download sequence
MEAFGGSARN FYGPMVSDLK AVGKKSLEWD LNDCKWDGDL FTASPLNSIP SDFRSRQLFP 60 VQPETPSNAG LSNSSSSGSD DISPGNEKGK RELEKRRRAT FVENEELNNE AGSLNLKLGE 120 QAYPIMEGEV QTGKKTKIVG TTLNRAVCQV EDCKADLSHA KDYHRRHKVC DMHSKATKAR 180 VGNVLQRFCQ QCSRFHVLQE FDEGKRSCRR RLAGHNRRRR KTHPDPVVNG GSLNDERGSS 240 YLLISLLRIL SNMQSNSSDQ TKDQDLLSHL LRSLANLAGT VDGRSISALL PGSQGLLNSG 300 PSVQTAQKVP DMVSNGCEPS RPSVSASKRD DCVNLEDPLR PIRQCPTVPA SDLLQKRISS 360 VDADHRSLQV VSGIQAAKPL PSRDSVPSKS VAPDATMGRM QLNGIDLNNT YDDSQDYLGN 420 LGSSHSPVNP GTVSLGFPLW MQQESQKSSP PQTSGTSDST STQSPSTSSG EGQSRTDRIV 480 FKLFGKDPND LPFVLRSQIL DWLSHSPSDI ESYIRPGCII LTIYLRLEKS TWEELCCHLG 540 SNLKRLLHAA NDPFWTTGWV YTRVQQNVAF TYNGQVVLDT PLPLKSHKNC RISYIKPIAV 600 SLSERAQFVV KGFNLSRSTT RLLCALEGKY LAQETCYDLM DSADTTVEHD EQHCLRFSCS 660 IPNVTGRGFI EVEDHGLSSS FFPFIVAEQE VCSEICMLEG VIEVAETADD IQREPEKLEA 720 KNLAMDFIHE LGWLLHRSHT KFRLGHMDPN LDLFPFRRFR LLMEFSMDHD WCAVVKKLLG 780 ILFEGNVDAG EHPSIELGLL DMSLLHRAVR RKCRSMVELL LRFVPDKGLD KTGSEQKQQV 840 DRDGNNFLFK PDAVGPMGLT PLHVAASTDG CEIILDALTD DPGKVGIEAW KYARDSTGLT 900 PNDYACLRGR YSYLHIVQRK ISKKLESGQV VLDIPGTILD SNSKQKQSDG HKSSKVASLE 960 TEKIEIKAMQ GHCKLCEMKL AYGNTRSLVY RPAMLSMVAI AAVCVCVALL FKSSPEVVYV 1020 FQPFRWELLK YGPS

Sequence ? help Back to Top

Protein Sequence Length: 1034 aa Download sequence

MEAFGGSARN FYGPMVSDLK AVGKKSLEWD LNDCKWDGDL FTASPLNSIP SDFRSRQLFP  60
VQPETPSNAG LSNSSSSGSD DISPGNEKGK RELEKRRRAT FVENEELNNE AGSLNLKLGE  120
QAYPIMEGEV QTGKKTKIVG TTLNRAVCQV EDCKADLSHA KDYHRRHKVC DMHSKATKAR  180
VGNVLQRFCQ QCSRFHVLQE FDEGKRSCRR RLAGHNRRRR KTHPDPVVNG GSLNDERGSS  240
YLLISLLRIL SNMQSNSSDQ TKDQDLLSHL LRSLANLAGT VDGRSISALL PGSQGLLNSG  300
PSVQTAQKVP DMVSNGCEPS RPSVSASKRD DCVNLEDPLR PIRQCPTVPA SDLLQKRISS  360
VDADHRSLQV VSGIQAAKPL PSRDSVPSKS VAPDATMGRM QLNGIDLNNT YDDSQDYLGN  420
LGSSHSPVNP GTVSLGFPLW MQQESQKSSP PQTSGTSDST STQSPSTSSG EGQSRTDRIV  480
FKLFGKDPND LPFVLRSQIL DWLSHSPSDI ESYIRPGCII LTIYLRLEKS TWEELCCHLG  540
SNLKRLLHAA NDPFWTTGWV YTRVQQNVAF TYNGQVVLDT PLPLKSHKNC RISYIKPIAV  600
SLSERAQFVV KGFNLSRSTT RLLCALEGKY LAQETCYDLM DSADTTVEHD EQHCLRFSCS  660
IPNVTGRGFI EVEDHGLSSS FFPFIVAEQE VCSEICMLEG VIEVAETADD IQREPEKLEA  720
KNLAMDFIHE LGWLLHRSHT KFRLGHMDPN LDLFPFRRFR LLMEFSMDHD WCAVVKKLLG  780
ILFEGNVDAG EHPSIELGLL DMSLLHRAVR RKCRSMVELL LRFVPDKGLD KTGSEQKQQV  840
DRDGNNFLFK PDAVGPMGLT PLHVAASTDG CEIILDALTD DPGKVGIEAW KYARDSTGLT  900
PNDYACLRGR YSYLHIVQRK ISKKLESGQV VLDIPGTILD SNSKQKQSDG HKSSKVASLE  960
TEKIEIKAMQ GHCKLCEMKL AYGNTRSLVY RPAMLSMVAI AAVCVCVALL FKSSPEVVYV  1020
FQPFRWELLK YGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein