PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g082010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 330aa MW: 36531.1 Da PI: 8.2147 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.4 | 2.6e-08 | 174 | 221 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k a +L + ++Y++sLq Pd.00g082010.m01 174 SHSLAERVRREKISERMKMLQRLVPGC----DKVTGRAVMLDEIINYVQSLQ 221 8*************************9....55599***************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 330 aa Download sequence |
MAAFSYHPAF LLDSIFLPYT PNNINIDDHF SPSYPSEPLI LEVHNTDSRA VESSCTVDHS 60 SAKVSLSDNE PSVTKKQSTE SSTVVDKLET GEQVTQKVTS MDKKRKNRNG SSLNSAQSKA 120 SREHKGKKQK KLDGAEKAEE KKAKSDKKDQ VKVGDEPPTG YIHVRARRGQ ATDSHSLAER 180 VRREKISERM KMLQRLVPGC DKVTGRAVML DEIINYVQSL QNQVEFLSMK LASVNPLFYD 240 FGMDLGALMV KPERLSSMAS PYPSVPQCSP TQPTAFADTS TNITTFSTAN NYPFLDGSAS 300 ILLQQGQRPN DFSQDSESLI CPHKHTGICL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 103 | 130 | KKRKNRNGSSLNSAQSKASREHKGKKQK |
2 | 103 | 144 | KKRKNRNGSSLNSAQSKASREHKGKKQKKLDGAEKAEEKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-57 | bHLH family protein |