PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g081370.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 577aa MW: 62733.5 Da PI: 8.7047 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 96.5 | 2.5e-30 | 70 | 154 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r++ lk+plWe+vs+k+ e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f++lea Pd.00g081370.m02 70 RWPRQETLALLKIRSEMDVSFRDATLKGPLWEDVSRKLVELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YKFFSELEA 154 8*********************************************************************866665..******985 PP | |||||||
2 | trihelix | 107.7 | 7.5e-34 | 338 | 423 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +e+r++++ k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a Pd.00g081370.m02 338 RWPKAEVLALIKLRSGLESRYQEAGPKGPLWEEISAGMGRMGYKRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHELDA 423 8*********************************************************************8.99999********85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 577 aa Download sequence |
MAAAAAEAGD QAQLVEAASP ISSRPPASAS VNLDELMTLS GAAAAAEDAL AASRDEADRG 60 GGDVGSSGNR WPRQETLALL KIRSEMDVSF RDATLKGPLW EDVSRKLVEL GYKRSAKKCK 120 EKFENVHKYY KRTKEGRAGR QDGKSYKFFS ELEALHGTAA ATSSVNVSAS PAVHVTHASP 180 NPVSIGFSNP MPISSFRMSP TIPVMQKQET MQQRFLEVIE KREQDRTIRE EAWKRQEMAR 240 LTREHELMSQ ERAISASRDA AIISFLQKIT GQTIQLPPPV NVHVAPPPPV PPSVPVVTPL 300 AQQSVVMAVP EQQVQPPQEN IASGGGAGGS LEPASSSRWP KAEVLALIKL RSGLESRYQE 360 AGPKGPLWEE ISAGMGRMGY KRSSKRCKEK WENINKYFKK VKESNKKRPE DAKTCPYFHE 420 LDALYRKRIL GGGGGGGSSS SLGTQNRLEQ PQQQQLQLEN PKSDSATQPQ DRSLEAQPSV 480 PVMPQTQEAV VATAQSEDKN GDHSTNVETS NVGLRANLFG EATDEAAKKP EDIVKELMQQ 540 QVHDHLQQGI EFQKQNTTGP SSNGGGNGAA SFLAMVQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 113 | 121 | KRSAKKCKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76880.1 | 7e-66 | Trihelix family protein |